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GRIDSS: the Genomic Rearrangement IDentification Software Suite
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Ignore incorrect direction assemblies #173

Open d-cameron opened 6 years ago

d-cameron commented 6 years ago

Assembly breakends generated from anchoring bases should be ignored. That is, a forward assembly should only call the breakpoints consistent with the forward orientation.

d-cameron commented 6 years ago

Implementing by ignoring all assembly SVs where the SV occurs entirely within the contig anchor