search

ParBLiSS / FastANI

Fast Whole-Genome Similarity (ANI) Estimation
Apache License 2.0
374 stars 67 forks source link

Issue opening resulting .pdf of Visualize.R #20

Open russellj7 opened 6 years ago

russellj7 commented 6 years ago

Hello, Sorry in advance for such a basic question.

I've generated the ". visual.pdf" file as demonstrated with the accompanying "visualize.R" script without any errors. However, I haven't found a program that is able to open the file on Mac (e.g. Preview, Adobe Reader). Trying to open the file returns a "file is damaged and could not be repaired/opened" error. Thinking it had something to do with the extension I changed it to just .pdf with no success.

Any suggestions on how to open the plot file?

Thanks!

cjain7 commented 6 years ago

Hi, can you double-check if you have genoPlotR library installed in R? Secondly, would it be possible to share the sequence of commands that you ran for FastANI and the script?