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ParBLiSS / FastANI

Fast Whole-Genome Similarity (ANI) Estimation
Apache License 2.0
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System requirements and usage with accession numbers #30

Closed vinisalazar closed 5 years ago

vinisalazar commented 5 years ago

  1. Does this package have any system requirements? I have a MacBook Pro 8gb RAM and 2,6 GHz i5. Is it enough to small whole genomes (5-10MB fasta files)?

  2. Can it be used with NCBI accession numbers only? If not, do you plan on working on this feature? I could potentially contribute.

thanks V

vinisalazar commented 5 years ago

Apologise me for this issue,

It worked on my computer.

As for the accession number feature, I'm afraid that because the code is in C++ I cannot contribute.

Thanks for the tools it's quite fast.