Parietal-INRIA fmralign issues

Parietal-INRIA / fmralign

Functional alignment and template estimation library for functional Magnetic Resonance Imaging data

https://parietal-inria.github.io/fmralign/

BSD 3-Clause "New" or "Revised" License

20 stars 7 forks source link

issues

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Patch fix on #51

#52 emdupre closed 1 year ago
1
[ENH] Bump to nilearn v0.9

#51 emdupre closed 1 year ago
2
Add Piecewise FastSRM

#50 hugorichard closed 9 months ago
6
Add PiecewiseSRM to the package

#49 thomasbazeille opened 3 years ago
10
Changing OT backend from POT to OTT

#48 thomasbazeille closed 3 years ago
0
Version2

#47 thomasbazeille closed 4 years ago
0
[FIX, ENH, MRG] Improve clustering functions, tests,

#46 thomasbazeille closed 4 years ago
15
[BUG] If 'clustering' is Nifti and n_pieces !>1, 'clustering' is not used and only one parcel is generated

#45 thomasbazeille closed 4 years ago
1
fix: update get_data to get_fdata method

#44 emdupre closed 4 years ago
0
[fix] reduce warnings

#43 emdupre closed 4 years ago
3
[doc] improve error when calling unrecognized alignment method

#42 emdupre closed 4 years ago
1
[DOC] Note recommended region size for OT convergence

#41 emdupre closed 4 years ago
0
[ENH] Adding score metrics

#40 emdupre closed 4 years ago
8
Reput hierarchical_kmeans in fmralign

#39 thomasbazeille closed 4 years ago
0
[DOC] Improve documentation based on feedback

#38 thomasbazeille opened 4 years ago
0
Implementation of reconstruction error ?

#37 emdupre closed 4 years ago
7
Running `ridge_cv` with a pre-defined parcellation yields ValueError

#36 emdupre closed 4 years ago
3
Unlock ReNA if nilearn version is enough

#35 thomasbazeille closed 5 years ago
0
Profiling estimates for optimal transport

#34 emdupre closed 4 years ago
10
Readme Release Update

#33 thomasbazeille closed 5 years ago
0
[MRG] API Improvements to solve #22 and #19

#32 thomasbazeille closed 5 years ago
0
[MRG] Alignment methods benchmarking example and documentation

#31 thomasbazeille closed 5 years ago
1
[MRG] Sphinx, narrative documentation...

#30 thomasbazeille closed 5 years ago
1
[MRG] Parcellation(#6) and solve issues #16 and #17

#29 thomasbazeille closed 5 years ago
1
Continous Integration improvement specification

#28 thomasbazeille closed 5 years ago
1
Fixing deprecated argument in Circle CI configuration

#27 thomasbazeille closed 5 years ago
0
[MRG] pandas upgrade

#26 bthirion closed 5 years ago
0
Incompatibility with recent pandas version

#25 bthirion closed 5 years ago
1
Fixing deprecated argument in CircleCI env creation

#24 thomasbazeille closed 5 years ago
0
Make POT an optional dependency

#23 thomasbazeille closed 5 years ago
5
Improve parallelization

#22 thomasbazeille closed 5 years ago
2
[MRG] Pass parallelization back-end as an argument

#21 thomasbazeille closed 5 years ago
3
Weird cases can happen with TemplateAlignment()

#20 thomasbazeille opened 5 years ago
0
Input list of lists of Niimgs in TemplateAlignment class

#19 thomasbazeille closed 5 years ago
2
make POT and optional dependency

#18 bthirion closed 5 years ago
5
Useless transpose executed in pairwise_alignment module

#17 thomasbazeille closed 5 years ago
2
'load_img' function seems to replicate existing functionality in Nilearn

#16 bthirion closed 5 years ago
1
Add an example showing bootstrapping impact for piecewise methods

#15 thomasbazeille opened 5 years ago
0
Add an example explaining various parcellation methods and their impact on alignment

#14 thomasbazeille opened 5 years ago
0
Add a benchmark example on various alignment method results for the same tasks and proficiency

#13 thomasbazeille closed 5 years ago
1
Missing narrative documentation

#12 thomasbazeille closed 5 years ago
1
[MRG] Add circle ci

#11 thomasbazeille closed 5 years ago
2
[MRG] Implemented diagonal estimator to solve Issue #7

#10 thomasbazeille closed 5 years ago
3
Add an option to find Scaled Orthogonal transform through full SVD instead of truncated SVD

#9 thomasbazeille closed 5 years ago
0
Add a test for perturbation alignment or remove this option

#8 thomasbazeille closed 5 years ago
1
Implement a diagonal transformation, projecting X on Y through voxel signal scaling

#7 thomasbazeille closed 5 years ago
4
Improve parcellation API and capabilities

#6 thomasbazeille closed 5 years ago
7
[MRG] Template alignment module and tests

#5 thomasbazeille closed 5 years ago
6
[MRG] Pairwise alignment module, tests and examples

#4 thomasbazeille closed 5 years ago
6
Alignment methods and tests

#3 thomasbazeille closed 5 years ago
2

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