empty BWA database - Githubissues

ParkinsonLab / MetaPro_tutorial

Microbiome tutorial, running on MetaPro

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empty BWA database #3

Closed LiZhihua1982 closed 4 weeks ago

LiZhihua1982 commented 2 months ago

2024-07-04 10:43:25.907762 Running GA lib check 2024-07-04 10:43:25.907781 BWA DB check: /data/GJ_RNA_metapro_out/GA_pre_scan/final_results 2024-07-04 10:43:25.907832 Error: no fasta files found. BWA only accepts .fasta extensions empty BWA database

billytaj commented 4 weeks ago

you're confusing the tutorial with the main pipeline. They are in separate repositories for a reason. Please use the main pipeline to process your data.