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ParticulateFlow / CFDEMcoupling-PFM

This is an academic adaptation of the CFDEMcoupling software package, released by the Department of Particulate Flow Modelling at Johannes Kepler University in Linz, Austria http://www.jku.at/pfm
GNU General Public License v3.0
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Problem with Installation of CFDEM on University HPC #11

Closed shaikasif808 closed 5 months ago

shaikasif808 commented 6 months ago

Hi, I am trying to install the CFDEM on the TUHH HPC cluster but I am getting the following error.

  1. After cloning with LIGGGHTS-PFM repo, I created an src-build folder.
  2. By using the ccmake ../src ; I updated the CMAKE_BUILD_TYP to release
  3. After running make -j from src-build I am getting this warning message at end:

  4. image

  5. On HPC only vtk 8.0.1 version module is available and when I checked for the dependencies of this file, I found that linmpi.so.20 is missing.

  6. image

At the end the log_compilation_is_fail, Is it due to the vtk missing dependency or HPC problem.

Regards Asif

simonPFM commented 5 months ago

Hi Asif, does your university HPC support singularity/docker images? Regards, Simon

shaikasif808 commented 5 months ago

Dear Simon, On TUHH HPC we load the module from the list of available modules via bashrc.

I am new to using the HPC, so I was unable to find out if HPC is using the docker or singularity.

simonPFM commented 5 months ago

Ok, maybe you ask your system administrator. In case that singularity or docker are available, I can provide proper images for LIGGGHTS and CFDEMcoupling, which allow their use on different architectures.

shaikasif808 commented 5 months ago

Sure, I will get in touch with the HPC admin and get this info.

Once again thank you very much for your help.

shaikasif808 commented 5 months ago

Hi Simon, The HPC does not support the singularity or docker image.

Luckily, we found the solution and now CFDEM is running on our HPC.

There was a problem with VTK module 8.0.1 and now we downgraded it to VTK 7.1.1, which is a more compatible version for LIGGGHTS and OpenFOAM 6.

Once again thank you very much for your response :)