PathologyDataScience / HistomicsML2

A tool for training machine-learning models with whole-slide imaging datasets
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data-create #30

Closed slee172 closed 5 years ago

slee172 commented 5 years ago

Dataset creation is updated.

/dataset directory inside the docker image is removed to avoid the confusion between the local machine and the docker image.

Instead, we find the name of the project directory using -v ${PWD##*/}.

Using this way, we can remove all paths which are unnecessary and create the slide information with the location of the tif images.

This update is closely related to other updates with creating multiple datasets under a master project folder.