PathologyDataScience / HistomicsML2

A tool for training machine-learning models with whole-slide imaging datasets
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Added docker examples #59

Closed slee172 closed 4 years ago

slee172 commented 4 years ago

Docker example scripts are updated.

Under the directory 'histomicsmlweb_example',

Dockerfile - Docker script. BRCA-pyramids-1.csv - whole slide image information. BRCA-spboundaries-1.txt - whole slide image boundary information. db_run.sh - MySQL script. db_setup.sql - MySQL database tables.

Under the directory 'histomicsmldb_example',

Dockerfile - Docker script 000-default.conf - Apache server configuration BRCA-pyramids-1.csv - whole slide image information BRCA-spfeatures-1.h5 - whole slide image boundary feature information accounts.php - sample account information pca_model_sample.pkl. - PCA transformation slide_info.csv - whole slide image information