Displaying a slide in a screen view

PathologyDataScience / HistomicsML2

A tool for training machine-learning models with whole-slide imaging datasets

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Displaying a slide in a screen view #62

Closed slee172 closed 3 years ago

slee172 commented 3 years ago

@Reasat But in the next stage, I am facing this Note that in the generated slide_info.csv the location of the file is written down as /datasets/myproject/tif/CMU-1-JP2K-33005.svs.dzi.tif but the actual file name in the tif folder is CMU-1-JP2K-33005.dzi.tif (without svs). Tried with both filenames, but got the same error.

slee172 commented 3 years ago

There might be many possible reasons not for displaying a slide in a screen view. The error "Unable to open [object Object] HTTP 404 attempting to load TileSource" may indicate that 1) The slide is not properly formatted. 2) The location of the slide is not found. 3) The image server is not running. and so on. I would suggest you use the slide example here or identify the slide location in the database (we use mysql).