Open ACColin opened 2 years ago
Hallo Anne-Cecile.
Sorry for my delayed reply. I was on holiday in the last four weeks.
The process time of bacoca depends on the amount of input data. Sometimes it can take more than a day, but usually the overall process time should be shorter. Unfortunately, bacoca is not doing any checkpointings.
Best
Patrick
Dr. Patrick Kück Algorithmic Development Leibniz Institute for the Analysis of Biodiversity Change Adenauerallee 160, 53113 Bonn, Germany email: @.*** www.bonn.leibniz-lib.de
Gesendet: Dienstag, 12. Juli 2022 um 05:00 Uhr Von: "Anne-Cecile Colin" @.> An: "PatrickKueck/BaCoCa" @.> Cc: "Subscribed" @.***> Betreff: [PatrickKueck/BaCoCa] Checkpointing for job management (Issue #2)
Hi,
I am running BaCoCa on a HPC cluster and I have seen another issue mentioning the analysis running for multiple days. Does the program support checkpointing the analysis to resume in a subsequent job after reaching the 48h limit? I couldn't find information regarding this in the manual.
Many thanks, Anne-Cecile
— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you are subscribed to this thread.Message ID: @.***>
Hi,
I am running BaCoCa on a HPC cluster and I have seen another issue mentioning the analysis running for multiple days. Does the program support checkpointing the analysis to resume in a subsequent job after reaching the 48h limit? I couldn't find information regarding this in the manual.
Many thanks, Anne-Cecile
edit: the results came back very fast, 48H was way more than enough