PatrickKueck / FASconCAT-G

FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignment files for phylogenetic and population genetic purposes. The main options include sequence renaming, file format conversion, sequence translation, consensus generation of predefined sequence blocks, and RY coding as well as site exclusions in nucleotide sequences. FASconCAT-G implemented process options can be invoked in any combination and performed during a single process run. FASconCAT-G can also read in and handle different file formats (FASTA, CLUSTAL, and PHYLIP) in a single run.
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syntax error on startup #1

Open melissawhitaker opened 3 years ago

melissawhitaker commented 3 years ago

Hello, If I understand the manual correctly, I should be able to open a FASconCAT-G menu by typing:

perl FASconCAT-G_v1.04.pl

However I receive the following error message:

[melliwhitaker@boslogin04 EP]$ perl FASconCAT-G_v1.04.pl syntax error at FASconCAT-G_v1.04.pl line 9, near "<" Excessively long <> operator at FASconCAT-G_v1.04.pl line 20.

Can you please advise? Many thanks, melissa

PatrickKueck commented 3 years ago

Please, can you send a screenshot. Otherwise, its difficult for me to help you. FCC-G has been used several times since its publication and we never got a problem like that.

 

Best

 

Patrick  


Dr. Patrick Kück Algorithmic Development & Computational Biology Zoological Research Museum Alexander Koenig (ZFMK) Adenauerallee 160, 53113 Bonn, Germany www.zfmk.de

   

Gesendet: Donnerstag, 01. Oktober 2020 um 11:48 Uhr Von: "Melissa Whitaker" notifications@github.com An: "PatrickKueck/FASconCAT-G" FASconCAT-G@noreply.github.com Cc: "Subscribed" subscribed@noreply.github.com Betreff: [PatrickKueck/FASconCAT-G] syntax error on startup (#1)

 

Hello, If I understand the manual correctly, I should be able to open a FASconCAT-G menu by typing:

perl FASconCAT-G_v1.04.pl

However I receive the following error message:

[melliwhitaker@boslogin04 EP]$ perl FASconCAT-G_v1.04.pl syntax error at FASconCAT-G_v1.04.pl line 9, near "<" Excessively long <> operator at FASconCAT-G_v1.04.pl line 20.

Can you please advise? Many thanks, melissa

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