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PatrickWeller / PanelPal

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Write python function to query panel app API, creating a list of coordinates #2

Closed PatrickWeller closed 1 week ago

PatrickWeller commented 2 weeks ago

Using the Panel App API, we want to be able to submit a panel number e.g. R21, and then return some sort of structured data back. This could be a dictionary or a list, but we want to be able to then pass that structured data into another function for generating a Bed File for a bioinformatics pipeline automation (see https://github.com/PatrickWeller/PanelPal/issues/4)

PatrickWeller commented 1 week ago

This initial implementation was OK for the first sprint. It has now been superceded by further functions that use the variant validator API to get exon coordinates instead of just gene start and end coordinates.