issues
search
PaulJonasJost
/
PEtab_GUI
a graphical user-interface for pyPESTO and PEtab
0
stars
0
forks
source link
Good Defaults
#32
Open
PaulJonasJost
opened
2 weeks ago
PaulJonasJost
commented
2 weeks ago
What are best defaults for different columsn in the model?
Every Optional column with its default, e.g. Distribution with normal
observable table
observable name = observable id
observable formula: if it starts with "observable_" try with prefix and without whether id is in sbml model, use that as default
condition
name == id
Any other value by majority vote as usual one or two things are changed across multiple conditions?
parameter
estimate = 1
nominal = Taken from SBML
lower/upper bound -> min max of current columns
measurement
noise based on previous experience of same observable?
simulationCondition = "last added"?
What are best defaults for different columsn in the model?
observable table
condition
parameter
measurement