I have encountered with a strange error about illegal operation when trying to use scibet for cell annotations, it seems something is wrong with the DsGene function, even I have already limited the number of threads to 1:
** caught illegal operation
address 0x7f6a05863117, cause 'illegal operand'
zkk-967
commented
2 weeks ago
Hello,
I have encountered with a strange error about illegal operation when trying to use scibet for cell annotations, it seems something is wrong with the DsGene function, even I have already limited the number of threads to 1:
** caught illegal operation address 0x7f6a05863117, cause 'illegal operand'
Traceback: 1: DsGene(expr, labels_in, FALSE, k, a, n_threads) 2: Learn(train, NULL, k, 0) 3: scibet::SciBet(exp, test) 4: scibet(test, train, label_train, ...)**
It is wierd that this error only occurs when I try to hang up this analysis as background task using command like below:
nohup Rscript cell_anno.R &
, and when I try to do the annotations line by line in the R studio, this error disappears.
Could anyone tell me why? It would really be helpful.
Sincerely yours.