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PavlidisLab
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GemmaDE
Discover biological conditions associated with differential gene expression by compiling information from >10,000 published experiments
MIT License
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New workflow
#62
oganm
opened
1 year ago
0
nullset changes
#61
oganm
opened
1 year ago
0
Assessment the affects of permutations
#60
oganm
opened
1 year ago
0
Skip inference on EFO
#59
ppavlidis
opened
1 year ago
0
"file upload" feature needs work
#58
ppavlidis
opened
1 year ago
0
Removal of individual studies from the corpus
#57
oganm
closed
1 year ago
0
precompute tags generates redundant tags
#56
oganm
opened
1 year ago
2
NULL generations for different options
#55
oganm
opened
1 year ago
1
Gene contributions window doesn't seem to be working properly
#54
oganm
closed
1 year ago
0
Use a widget instead of loose javascript code and changes to shiny for tomselect
#53
oganm
opened
1 year ago
0
Evaluate the effects of Geeq scores
#52
oganm
opened
1 year ago
0
Regenerate data with clean cache
#51
oganm
opened
1 year ago
0
API-package pair
#50
oganm
opened
1 year ago
0
Expose more details about the results
#49
oganm
opened
1 year ago
0
Create a help/about page
#48
oganm
opened
1 year ago
0
Improve readability of the download button
#47
oganm
closed
1 year ago
0
Move progress bar to the middle of the screen
#46
oganm
closed
1 year ago
0
Filter genes based on which taxons are selected
#45
oganm
closed
1 year ago
0
Trimming of unhelpful fields
#44
oganm
opened
1 year ago
1
Search field, remove text when match is found
#43
oganm
closed
1 year ago
1
Include supporting experiments in the downloaded file
#42
oganm
closed
1 year ago
0
core_split in analysis results as a gene
#41
oganm
closed
1 year ago
0
Re-creation of the thesis results with the new data and API
#40
oganm
opened
1 year ago
0
Test statistic range
#39
oganm
closed
1 year ago
0
Clean human data from mouse
#38
oganm
closed
1 year ago
2
Multifunctionality in the analysis
#37
oganm
opened
2 years ago
0
Make checkboxes bore readable
#36
oganm
closed
1 year ago
0
Speed bump and fixes
#35
oganm
closed
2 years ago
2
Clarity of current search paramaters
#34
oganm
opened
2 years ago
1
Drugbank xml
#33
oganm
closed
2 years ago
2
Unclear line in process.R
#32
oganm
closed
2 years ago
3
Packaging
#31
oganm
closed
1 year ago
0
Bottleneck
#30
oganm
closed
1 year ago
0
28 July Meeting Points
#29
oganm
closed
1 year ago
2
Revert "Updating branch"
#28
k8iechen
closed
2 years ago
0
Updating branch
#27
k8iechen
closed
2 years ago
0
update to new gemma
#26
oganm
closed
2 years ago
1
Use filtered data with graph
#25
k8iechen
closed
2 years ago
0
Enhancements
#24
k8iechen
closed
2 years ago
0
removed 'I'm feeling lucky' option
#23
k8iechen
closed
2 years ago
0
Popup error message
#22
dima-v-v
opened
2 years ago
2
Make test statistic relative to the number of genes
#21
ppavlidis
closed
2 years ago
1
Provide a better means for drilling into underlying data
#20
ppavlidis
opened
2 years ago
1
Avoid grouping of experiments by EFO term "experimental process"
#19
ppavlidis
opened
2 years ago
1
User interface fixes
#18
ppavlidis
opened
2 years ago
4
Gene search not working
#17
yavyx
closed
2 years ago
2
Replace gene contributions radial plot
#16
yavyx
closed
2 years ago
0
Explanations on results table headers
#15
yavyx
closed
2 years ago
1
Loading animation on app start
#14
yavyx
closed
2 years ago
0
Reset button duplicates search box
#13
yavyx
closed
2 years ago
0
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