Background:
Email from peggy on 2022-09-10
"Can you update the information in PeanutBase/Gigwa so that the actual genotypes are showing? We noted the error at an African Breeder meeting last week in Senegal. Thanks. Peggy"
Peggy has now provided a mapping excel file: "AG_4062_sample_list.1.xlsx" which has CEL file to genotype.(Note & CAUTION: the genotype column has space in the string. This was a problem in the past)
Andrew tested:
".... but as far as I can tell it has the genotype info, e.g., see the screenshot below. I suspect it may be an issue of the interface being non-obvious, but I could be mistaken. Anyway, feel free to send more details if there's need for further follow-up. adf"
(Clicking the row shows a popup with genotype)
My test:
Investigate Genotype dropdown: choose 'on 1 group'.
Click Individuals and start typing a genotype name. If it is there, it should show up in the dropdown.
I couldn't find a few test cases from the excel file with this test. Example:
YC_GT-C20_1
Background: Email from peggy on 2022-09-10 "Can you update the information in PeanutBase/Gigwa so that the actual genotypes are showing? We noted the error at an African Breeder meeting last week in Senegal. Thanks. Peggy"
Peggy has now provided a mapping excel file: "AG_4062_sample_list.1.xlsx" which has CEL file to genotype.(Note & CAUTION: the genotype column has space in the string. This was a problem in the past)
Andrew tested: ".... but as far as I can tell it has the genotype info, e.g., see the screenshot below. I suspect it may be an issue of the interface being non-obvious, but I could be mistaken. Anyway, feel free to send more details if there's need for further follow-up. adf" (Clicking the row shows a popup with genotype)
My test: Investigate Genotype dropdown: choose 'on 1 group'. Click Individuals and start typing a genotype name. If it is there, it should show up in the dropdown. I couldn't find a few test cases from the excel file with this test. Example: YC_GT-C20_1