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PecanProject / bety

Web-interface to the Biofuel Ecophysiological Traits and Yields Database (used by PEcAn and TERRA REF)
https://www.betydb.org
BSD 3-Clause "New" or "Revised" License
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Setup development server #7

Closed dlebauer closed 11 years ago

dlebauer commented 11 years ago

I have installed pecandev.igb.illinois.edu for use as a testing site.

The intent of this is to replicate the production server, which runs RHEL 5.8. Thus, I have installed CentOS 5.8. And we should use the same repositories and versions as the production server (the epel repository by default).

To complete this task:

Everything should be as similar to the development machine as possible, including code should be in /usr/local/ebi, with a symlink from the folder used by apache.

kemball commented 11 years ago

BioCro, ED, and as a result PEcAn.all currently broken; requiring slightly different version of hdf5/ncdf4.

sipnet, and all other PEcAn dependencies installed and working correctly.

BetyDB working correctly.

dlebauer commented 11 years ago

Nice work. I will close this, as the intent of the issue was to setup a dev server for BETYdb, not for PEcAn. I should have made that more clear in the first place.

carlcrott commented 11 years ago

I've mentioned a bit of testing on this to jeremy. Ensuring a http 200 on the image URLs should be sufficient. Should I add this to the suite?

kemball commented 11 years ago

The only reason I set up most of pecan was to enable some betydb features that rely on it. Once I had most of it set up or seemed convenient to finish it up, but it was harder than anticipated On Jun 12, 2013 12:19 PM, "David LeBauer" notifications@github.com wrote:

Nice work. I will close this, as the intent of the issue was to setup a dev server for BETYdb, not for PEcAn. I should have made that more clear in the first place.

— Reply to this email directly or view it on GitHubhttps://github.com/PecanProject/bety/issues/7#issuecomment-19340808 .

dlebauer commented 11 years ago

What is the underlying cause of this error? This test sounds like a good test for the error, but not of the underlying cause (if known, in this case).

On Wed, Jun 12, 2013 at 12:21 PM, Carl Crott notifications@github.comwrote:

I've mentioned a bit of testing on this to jeremy. I think testing the URLs for the images as returning 200 should be sufficient. Should I add this to the suite?

— Reply to this email directly or view it on GitHubhttps://github.com/PecanProject/bety/issues/7#issuecomment-19340971 .

kemball commented 11 years ago

There's a few things that cause that to fail, mostly permissions errors or R misconfiguration. Checking that the script can still generate images should cover nearly everything. On Jun 12, 2013 12:44 PM, "David LeBauer" notifications@github.com wrote:

What is the underlying cause of this error? This test sounds like a good test for the error, but not of the underlying cause (if known, in this case).

On Wed, Jun 12, 2013 at 12:21 PM, Carl Crott notifications@github.comwrote:

I've mentioned a bit of testing on this to jeremy. I think testing the URLs for the images as returning 200 should be sufficient. Should I add this to the suite?

— Reply to this email directly or view it on GitHub< https://github.com/PecanProject/bety/issues/7#issuecomment-19340971> .

— Reply to this email directly or view it on GitHubhttps://github.com/PecanProject/bety/issues/7#issuecomment-19342388 .

dlebauer commented 11 years ago

there are other images that do not display, e.g. on the homepage of the redesign on pecandev

On Wed, Jun 12, 2013 at 12:51 PM, Jeremy Kemball notifications@github.comwrote:

There's a few things that cause that to fail, mostly permissions errors or R misconfiguration. Checking that the script can still generate images should cover nearly everything. On Jun 12, 2013 12:44 PM, "David LeBauer" notifications@github.com wrote:

What is the underlying cause of this error? This test sounds like a good test for the error, but not of the underlying cause (if known, in this case).

On Wed, Jun 12, 2013 at 12:21 PM, Carl Crott notifications@github.comwrote:

I've mentioned a bit of testing on this to jeremy. I think testing the URLs for the images as returning 200 should be sufficient. Should I add this to the suite?

— Reply to this email directly or view it on GitHub< https://github.com/PecanProject/bety/issues/7#issuecomment-19340971> .

— Reply to this email directly or view it on GitHub< https://github.com/PecanProject/bety/issues/7#issuecomment-19342388> .

— Reply to this email directly or view it on GitHubhttps://github.com/PecanProject/bety/issues/7#issuecomment-19342777 .