SDA name change

[helge22a]

Description

Reverting commits made in PR #2927 to remove "." from assim.sequential package. @infotroph @mdietze @serbinsh @DongchenZ @Qianyuxuan

I am not sure why GitHub is including other commits not related to ones I just made on this new branch, but I cannot figure out how to get rid of them?

Motivation and Context

Nimble throughs an error with package names containing "."

Review Time Estimate

• [ ] Immediately
• [ ] Within one week
• [ ] When possible

Types of changes

• [ ] Bug fix (non-breaking change which fixes an issue)
• [ ] New feature (non-breaking change which adds functionality)
• [ ] Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

• [ ] My change requires a change to the documentation.
• [ ] My name is in the list of CITATION.cff
• [ ] I have updated the CHANGELOG.md.
• [ ] I have updated the documentation accordingly.
• [ ] I have read the CONTRIBUTING document.
• [ ] I have added tests to cover my changes.
• [ ] All new and existing tests passed.

[mdietze]

noting from PEcAn meeting that @infotroph needs to check the impacts of this change on make, etc before pulling.

[infotroph]

Places I checked for build tool assumptions that might break on this name change:

• [x] Package version reporting functions in PEcAn.all? ✅: They match any package with "PEcAn" in its name and don't check for the dot
• [x] Makefile? ✅: Works entirely on directory names, not package names
• [x] scripts/ folder? I manually reviewed all contents to confirm...
  • [x] Most ✅: don't care about package names
  • [x] EFI scripts: ✅: are already updated to use new name
  • [x] generate_dependencies.R: ⚠️: Finds packages by matching on ^PEcAn. Technically this still works because the dot gets interpreted as a wildcard here, but it's misleading ✅: fixed in #3028, so OK for purposes of this PR.
  • [x] .github/workflows? ✅: all the package-specific steps are handled by Make, which I checked already.
  • [x] docker/? ✅: all the package-specific steps are handled by Make, which I checked already.