PecanProject / pecan

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.
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Adding SDA restart capability #3036

Closed helge22a closed 1 year ago

helge22a commented 2 years ago

Description

Condensing sda.enfk_MultiSite function with new functions metSplit, sda_matchparam, and build_X, added more comments to hopefully make this easier to work with. Now can run SDA at any time step (not only annual). Added new nimble model for running one site at a time through assimilation.

Motivation and Context

All changes necessary for scaling up SDA to continental scale/adding more data streams for NASA CMS project with @DongchenZ @serbinsh @mdietze @Qianyuxuan

Review Time Estimate

Types of changes

Checklist:

serbinsh commented 1 year ago

Wow @helge22a this is a LOT of work and a really nice PR! lots of great contributions here! I did my best to review but not sure i can dig deeper without a better understanding of running it all