pecan_version: Report installation source for each package

[infotroph]

Description

Uses the sources reported by sessioninfo::package_info; if sessioninfo isn't available* it falls back to the current behavior of only reporting versions.

Also adds a call to pecan_version to the default workflow, so that package versions get recorded in the run log.

Output on my machine before this change (and after it if sessioninfo weren't installed):

> PEcAn.all::pecan_version()
                  package v1.7.2  installed
3               PEcAn.all  1.7.2 1.7.2.9000
4         PEcAn.allometry  1.7.2      1.7.2
5       PEcAn.assim.batch  1.7.2      1.7.2
6  PEcAn.assim.sequential  1.7.2       <NA>
7            PEcAn.BASGRA  1.7.2      1.7.2
8         PEcAn.benchmark  1.7.2      1.7.2
9            PEcAn.BIOCRO  1.7.2      1.7.2
10            PEcAn.CABLE  1.7.2       <NA>
11            PEcAn.CLM45  1.7.2      1.7.2
14            PEcAn.DALEC  1.7.2      1.7.2
15  PEcAn.data.atmosphere  1.7.2      1.7.2
16   PEcAn.data.hydrology  1.7.2      1.7.2
17        PEcAn.data.land  1.7.2 1.7.2.9000
18      PEcAn.data.mining  1.7.2       <NA>
19      PEcAn.data.remote  1.7.2 1.7.2.9000
20               PEcAn.DB  1.7.2 1.7.2.9000
21        PEcAn.dvmdostem  1.7.2      1.7.2
23              PEcAn.ED2  1.7.2      1.7.2
24         PEcAn.emulator  1.7.2      1.7.2
25            PEcAn.FATES  1.7.2      1.7.2
26             PEcAn.GDAY  1.7.2      1.7.2
28            PEcAn.JULES  1.7.2      1.7.2
29            PEcAn.LDNDC   <NA>      1.7.2
30         PEcAn.LINKAGES  1.7.2      1.7.2
31           PEcAn.logger  1.8.0      1.8.1
32         PEcAn.LPJGUESS  1.7.2      1.7.2
33               PEcAn.MA  1.7.2      1.7.2
34             PEcAn.MAAT  1.7.2      1.7.2
35           PEcAn.MAESPA  1.7.2      1.7.2
36        PEcAn.ModelName  1.7.2      1.7.2
37   PEcAn.photosynthesis  1.7.2       <NA>
38           PEcAn.PRELES  1.7.2      1.7.2
39           PEcAn.priors  1.7.2      1.7.2
40             PEcAn.qaqc  1.7.2      1.7.2
41           PEcAn.remote  1.7.2      1.7.2
43         PEcAn.settings  1.7.2      1.7.2
44          PEcAn.SIBCASA   <NA>      0.0.1
45           PEcAn.SIPNET  1.7.2      1.7.2
46            PEcAn.STICS  1.7.2      1.7.2
47      PEcAn.uncertainty  1.7.2      1.7.2
48            PEcAn.utils  1.7.2      1.7.2
49    PEcAn.visualization  1.7.2      1.7.2
50         PEcAn.workflow  1.7.2      1.7.2
52               PEcAnRTM  1.7.2      1.7.2

Output on my machine after this change:

> PEcAn.all::pecan_version()
                  package v1.7.2  installed                                        source
3               PEcAn.all  1.7.2 1.7.2.9000                                         local
4         PEcAn.allometry  1.7.2      1.7.2                                         local
5       PEcAn.assim.batch  1.7.2      1.7.2 https://pecanproject.r-universe.dev (R 4.2.1)
6  PEcAn.assim.sequential  1.7.2       <NA>                                          <NA>
7            PEcAn.BASGRA  1.7.2      1.7.2                                         local
8         PEcAn.benchmark  1.7.2      1.7.2                                         local
9            PEcAn.BIOCRO  1.7.2      1.7.2                                         local
10            PEcAn.CABLE  1.7.2       <NA>                                          <NA>
11            PEcAn.CLM45  1.7.2      1.7.2                                         local
14            PEcAn.DALEC  1.7.2      1.7.2                                         local
15  PEcAn.data.atmosphere  1.7.2      1.7.2 https://pecanproject.r-universe.dev (R 4.2.1)
16   PEcAn.data.hydrology  1.7.2      1.7.2                                         local
17        PEcAn.data.land  1.7.2 1.7.2.9000                                         local
18      PEcAn.data.mining  1.7.2       <NA>                                          <NA>
19      PEcAn.data.remote  1.7.2 1.7.2.9000                                         local
20               PEcAn.DB  1.7.2 1.7.2.9000                                         local
21        PEcAn.dvmdostem  1.7.2      1.7.2                                         local
23              PEcAn.ED2  1.7.2      1.7.2                                         local
24         PEcAn.emulator  1.7.2      1.7.2                                         local
25            PEcAn.FATES  1.7.2      1.7.2                                         local
26             PEcAn.GDAY  1.7.2      1.7.2                                         local
28            PEcAn.JULES  1.7.2      1.7.2                                         local
29            PEcAn.LDNDC   <NA>      1.7.2                                         local
30         PEcAn.LINKAGES  1.7.2      1.7.2                                         local
31           PEcAn.logger  1.8.0      1.8.1 https://pecanproject.r-universe.dev (R 4.2.1)
32         PEcAn.LPJGUESS  1.7.2      1.7.2                                         local
33               PEcAn.MA  1.7.2      1.7.2                                         local
34             PEcAn.MAAT  1.7.2      1.7.2                                         local
35           PEcAn.MAESPA  1.7.2      1.7.2                                         local
36        PEcAn.ModelName  1.7.2      1.7.2                                         local
37   PEcAn.photosynthesis  1.7.2       <NA>                                          <NA>
38           PEcAn.PRELES  1.7.2      1.7.2                                         local
39           PEcAn.priors  1.7.2      1.7.2                                         local
40             PEcAn.qaqc  1.7.2      1.7.2                                         local
41           PEcAn.remote  1.7.2      1.7.2                                         local
43         PEcAn.settings  1.7.2      1.7.2                                         local
44          PEcAn.SIBCASA   <NA>      0.0.1                                         local
45           PEcAn.SIPNET  1.7.2      1.7.2                                         local
46            PEcAn.STICS  1.7.2      1.7.2                                         local
47      PEcAn.uncertainty  1.7.2      1.7.2 https://pecanproject.r-universe.dev (R 4.2.1)
48            PEcAn.utils  1.7.2      1.7.2                                         local
49    PEcAn.visualization  1.7.2      1.7.2                                         local
50         PEcAn.workflow  1.7.2      1.7.2                                         local
52               PEcAnRTM  1.7.2      1.7.2                                         local

*I think most PEcAn machines can be assumed to have sessioninfo; it's required by devtools. But this way we avoid a hard dependency.

Motivation and Context

Review Time Estimate

• [ ] Immediately
• [ ] Within one week
• [ ] When possible

Types of changes

• [ ] Bug fix (non-breaking change which fixes an issue)
• [ ] New feature (non-breaking change which adds functionality)
• [ ] Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

• [ ] My change requires a change to the documentation.
• [ ] My name is in the list of CITATION.cff
• [ ] I have updated the CHANGELOG.md.
• [ ] I have updated the documentation accordingly.
• [ ] I have read the CONTRIBUTING document.
• [ ] I have added tests to cover my changes.
• [ ] All new and existing tests passed.

[infotroph]

Test failures indicate a thinko in my test approach: Assumes PEcAn.all is already installed, so works during package check (R CMD check installs it to a temp library) but not when testing with testthat before installation (which loads the code into an R session but doesn’t change the output from packageVersion).

Marking this as draft while I think more; suggestions welcome in the meantime