Allometry paper

[mdietze]

Tasks required to complete the Allometries module and write up results

Data

• [ ] Add BAAD data #444
• [ ] Add Chojnacky et al 2014 data
• [ ] Add GlobAllomeTree #301

Code

• [ ] Tool for equation 'sanity check' to identify outliers
• [ ] Changes to predict to track individuals, sites: requested by @andydawson
• [ ] Check HB version convergence issues
• [ ] Extend model to include species effects
• [ ] Improve predict function's ability to use remote (archived) results
• [ ] Update vignette #446

Analysis

• [ ] Compare these equations to those in the Jenkins synthesis: Same spp groupings, diff breakdown of uncertainties, magnitude & relative importance of random, site, and spp variability
• [ ] Fit (& archive) alternative species groupings: global model PFTs, ED PFTs, PalEON , Harvard Forest
• [ ] Examine the change in parameter and predictive uncertainties at the tree scale
• [ ] Effects of spatial scale using FIA: when moving up spatial scale (tree, subplot, plot, landscape, region) how does that change which uncertainties dominate?
• [ ] Effects of plot size using large mapped stand (sample size vs allom error)

Writing

• [x] Migrate paper into Rmd
• [ ] Methods
• [ ] Intro
• [ ] Tables
• [ ] Figures
• [ ] Results & Discussion
• [ ] Abstract
• [x] Citation linkage: @ashiklom
• [ ] Revisions
• [ ] Submission

[mdietze]

Another data set https://www.sciencedirect.com/science/article/pii/S2352340918306978

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