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PeerHerholz / BIDSonym

a BIDS app for pseudo-anonymization of neuroimaging data
https://peerherholz.github.io/BIDSonym/
BSD 3-Clause "New" or "Revised" License
51 stars 12 forks source link

include more packages #9

Open PeerHerholz opened 5 years ago

PeerHerholz commented 5 years ago

Summary

This will be a permanently open issue to gather further tools and packages.

There are some other cool defacing tools out there we should include in BIDSonym. For example: DeepDeface.

Further software will be collected and documented in this issue, with the participating (and all other) folks deciding which tools will be included.

PeerHerholz commented 5 years ago

Just discovered that FSL now also has a defacing tool which is based on the one from UK Biobank. It's already included being called fsl_deface, however apparently not working properly (e.g., see here). Once it has been tested and working properly, we should include it, as we already have FSL in the docker container.

PeerHerholz commented 5 years ago

We should also add mridefacer!

PeerHerholz commented 5 years ago

mridefacer was added here.

yarikoptic commented 4 years ago

yes --- would be great to see fsl_deface be interfaced by BIDSonym!