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PejLab / ANEVA-DOT

Tests Allelic Expression data for extreme imbalance w.r.t. population
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Calculating Vg estimates from own data #9

Open scharf-f opened 1 year ago

scharf-f commented 1 year ago

Dear Aneva-Dot-Team,

thank you very much for this valuable resource.

As you know, depending on the tissue and the gene there are a few gaps in the GTEX data. I wanted to give it a shot to calculate Vg estimates from own in-house RNA-Seq data we have available. Can you indicate on how exactly this could be achieved (e.g. in R), do you possibly have sample code available?

Thank you very much!

Kind regards, Florentine

geocarvalho commented 1 year ago

Would be nice to try it on my datasets also :c @Catalysta @pejminister @wickdChromosome @ejsong37