Triaging Different ASL sequences into different parsing strategies - Githubissues

PennLINC / ASL-precurate

A tool to extract and parse ASL dicom headers before BIDS curation

BSD 3-Clause "New" or "Revised" License

1 stars 0 forks source link

Triaging Different ASL sequences into different parsing strategies #2

Open TinasheMTapera opened 2 years ago

TinasheMTapera commented 2 years ago

It's likely that different sequences will have different outputs from gdcm, need to build a mind-map of if-then statements for how to calculate different fields

Sources:

https://bids-specification.readthedocs.io/en/stable/99-appendices/12-arterial-spin-labeling.html#flowchart-based-on-dependency-table https://bids-specification.readthedocs.io/en/stable/04-modality-specific-files/01-magnetic-resonance-imaging-data.html#m0scan-metadata-fields http://www.neuroimagingprimers.org/examples/introduction-to-perfusion-quantification-using-asl/ https://asl-docs.readthedocs.io/en/latest/gui_tutorial.html https://pubmed.ncbi.nlm.nih.gov/24715426/ https://mriquestions.com/uploads/3/4/5/7/34572113/asl_review_1156841300209x_1-s2.0-s221156841300209x-main.pdf https://www.hindawi.com/journals/ijbi/2012/818456/ https://radiopaedia.org/articles/arterial-spin-labelling-mr-perfusion-2?lang=us https://neurostars.org/t/repetitiontime-parameters-what-are-they-and-where-to-find-them/20020/7

TinasheMTapera commented 2 years ago

Desired outcome:

Mindmap in the docs: https://pennlinc.github.io/docs/Tutorials/curating_asl/