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PennLINC / aslprep

Preprocessing of arterial spin labeling (ASL) data
https://aslprep.readthedocs.io
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Update fmriprep requirement from <=24.0.1,>=23.2 to >=23.2,<=24.1.0 #444

Closed dependabot[bot] closed 1 month ago

dependabot[bot] commented 1 month ago

Updates the requirements on fmriprep to permit the latest version.

Changelog

Sourced from fmriprep's changelog.

24.1.0 (September 16, 2024)

New feature release in the 24.1.x series.

Handling of gradient echo fieldmaps is improved.

  • FIX: Select volumetric dseg.tsv from recent TemplateFlow releases (#3257)
  • RF: Adapt to less T1w-centric smriprep (#3333)
  • RF: Use acres over vendored data loader (#3323)
  • DOC: Add benchmark page (#3312)
  • MAINT: Move to tox to simplify test/CI setup (#3326)
  • CI: Fix expected outputs for fieldmaps (#3321)

24.0.1 (July 16, 2024)

Bug fix release in the 24.0.x series.

This release resolves a bug with multi-volume single-band references. If multiple volumes are found, they are processed in the same way as the BOLD series is processed to produce a motion-correction reference.

  • FIX: Validate and summarize multi-volume sbrefs (#3320)
  • DOC: Address errors/warnings in RTD builds (#3325)
  • DOC: Read html_baseurl from RTD environment, if available (#3324)

24.0.0 (June 17, 2024)

New feature release in the 24.0.x series.

This release is an incremental improvement on 23.2.x, with some fixes for bugs discovered in the updated workflow.

New features include separation of HTML reports by session for subjects with many BOLD runs, a new --fs-no-resume option to improve interoperability with less typical FreeSurfer directories, such as those generated by longitudinal FreeSurfer or FastSurfer, and adoption of DatasetLinks and BIDS-URIs, to follow the recommendations of recent versions of BIDS.

With thanks to Dimitri Papadopoulos, Basile Pinsard, Celine Provins, Taylor Salo and Wang Hao-Ting for their contributions!

  • FIX: Add "double" type to allowed DisplacementFieldTransform (#3287)
  • FIX: Require recent templateflow, select correct aparc dseg.tsv (#3256)
  • FIX: Ensure proper templates are retrieved with sloppy (#3251)
  • FIX: Delete summary from functional report when separated by sessions (#3223)
  • FIX: Support lists in bids filter file containing null or * (#3215)
  • FIX: Re-enable anat fasttrack for dataset without t1w (#3202)
  • ENH: Use BIDSURI in init_ds_boldmask_wf (#3297)
  • ENH: Add templateflow to DatasetLinks (#3267)

... (truncated)

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codecov-commenter commented 1 month ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 84.34%. Comparing base (ef2dd7e) to head (315bac0).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #444 +/- ## ======================================= Coverage 84.34% 84.34% ======================================= Files 37 37 Lines 3986 3986 ======================================= Hits 3362 3362 Misses 624 624 ```

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