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PennLINC / fw-heudiconv

Heuristic-based Data Curation on Flywheel
BSD 3-Clause "New" or "Revised" License
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pip installl flywheel-sdk==16.0.5rc16 and fw-heudiconv version 0.4.0 says it is incompatible #96

Closed schenkerian closed 2 years ago

schenkerian commented 2 years ago

Describe the issue Installed flywheel-sdk==16.5.0rc5 and fw-heudiconv version 0.4.0 says it is incompatible. Error is: fw-heudiconv 0.4.0 has requirement flywheel-sdk~=14.6.5, but you have flywheel-sdk 16.5.0rc5.

Were you running fw-heudiconv locally or from Flywheel's GUI?

(flywheel) [brnelson@sciget ~]$ pip install flywheel-sdk==16.5.0rc5 Collecting flywheel-sdk==16.5.0rc5 Downloading flywheel_sdk-16.5.0rc5-py2.py3-none-any.whl (748 kB) |████████████████████████████████| 748 kB 3.8 MB/s Requirement already satisfied: requests-toolbelt in /project/ftdc_misc/software/pkg/miniconda3/envs/flywheel/lib/python3.8/site-packages (from flywheel-sdk==16.5.0rc5) (0.9.1) Requirement already satisfied: requests>=2.18.4 in /project/ftdc_misc/software/pkg/miniconda3/envs/flywheel/lib/python3.8/site-packages (from flywheel-sdk==16.5.0rc5) (2.24.0) Requirement already satisfied: urllib3>=1.15 in /project/ftdc_misc/software/pkg/miniconda3/envs/flywheel/lib/python3.8/site-packages (from flywheel-sdk==16.5.0rc5) (1.25.11) Requirement already satisfied: six>=1.10 in /project/ftdc_misc/software/pkg/miniconda3/envs/flywheel/lib/python3.8/site-packages (from flywheel-sdk==16.5.0rc5) (1.15.0) Requirement already satisfied: python-dateutil in /project/ftdc_misc/software/pkg/miniconda3/envs/flywheel/lib/python3.8/site-packages (from flywheel-sdk==16.5.0rc5) (2.8.1) Requirement already satisfied: certifi in /project/ftdc_misc/software/pkg/miniconda3/envs/flywheel/lib/python3.8/site-packages (from flywheel-sdk==16.5.0rc5) (2020.6.20) Requirement already satisfied: idna<3,>=2.5 in /project/ftdc_misc/software/pkg/miniconda3/envs/flywheel/lib/python3.8/site-packages (from requests>=2.18.4->flywheel-sdk==16.5.0rc5) (2.10) Requirement already satisfied: chardet<4,>=3.0.2 in /project/ftdc_misc/software/pkg/miniconda3/envs/flywheel/lib/python3.8/site-packages (from requests>=2.18.4->flywheel-sdk==16.5.0rc5) (3.0.4) Installing collected packages: flywheel-sdk

fw-heudiconv 0.4.0 requires flywheel-sdk~=14.6.5, but you'll have flywheel-sdk 16.5.0rc5 which is incompatible. Successfully installed flywheel-sdk-16.5.0rc5

TinasheMTapera commented 2 years ago

@schenkerian thanks for filing an issue; have you tried downgrading your flywheel-sdk version for compatibility with fw-heudiconv? You can do it in an isolated environment if preferred with conda: https://fw-heudiconv.readthedocs.io/en/latest/installation.html#install-start-up-miniconda

Then in that environment install the specific sdk version:

pip install 'flywheel-sdk==14.6.5' --force-reinstall
TinasheMTapera commented 2 years ago

@schenkerian just re-pinging, any updates on this issue? If not I will close it for housekeeping

schenkerian commented 2 years ago

Hi Tinashe,

No updates. You can close.

Thanks, Brian

From: Tinashe Michael Tapera @.> Sent: Monday, April 18, 2022 12:46 PM To: PennLINC/fw-heudiconv @.> Cc: Nelson, Brian @.>; Mention @.> Subject: [External] Re: [PennLINC/fw-heudiconv] pip installl flywheel-sdk==16.0.5rc16 and fw-heudiconv version 0.4.0 says it is incompatible (Issue #96)

@schenkerianhttps://github.com/schenkerian just re-pinging, any updates on this issue? If not I will close it for housekeeping

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