PennLINC / qsiprep

Preprocessing of diffusion MRI
http://qsiprep.readthedocs.io
BSD 3-Clause "New" or "Revised" License
138 stars 56 forks source link

[ENH] Add a utility for aggregating QA metrics on a cohort #163

Closed mattcieslak closed 3 years ago

mattcieslak commented 4 years ago

Idea

Make an entrypoint called something like qsiprep-aggregate that grabs QC data from the qsiprep outputs from a study and creates a CSV and/or json that can be loaded in a dmriprep-viewer-style app.

richford commented 4 years ago

Could this just be what happens by default when you change the usual BIDS-App participant parameter to group.

mattcieslak commented 4 years ago

I think in the long run we might save group for building an FOD template or something like that. I'm thinking we might be able to add some of the info into json sidecars that come out of the participant pipeline though, so you don't have to run an extra utility