Write out coregistration transform

PennLINC / qsiprep

Preprocessing of diffusion MRI

http://qsiprep.readthedocs.io

BSD 3-Clause "New" or "Revised" License

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Open tsalo opened 1 week ago

tsalo commented 1 week ago

QSIPrep doesn't currently write out the transform from dwiref to ACPC.

It would be written out as:

sub-<label>/
    dwi/
        <source_entities>_from-dwiref_to-ACPC_mode-image_xfm.h5

mattcieslak commented 1 week ago

The dwiref is already in acpc. Should we add back the identity transform?

tsalo commented 1 week ago

I think we should write out the dwiref in dwiref space in addition to the ACPC-space one.