calculate network controllability

PennLINC / qsirecon

Reconstruction of preprocessed q-space images (dMRI)

https://qsirecon.readthedocs.io/

BSD 3-Clause "New" or "Revised" License

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Open pinghongyeh opened 1 year ago

pinghongyeh commented 1 year ago

Hi, I would like to calculate network controllability using the scripts that have been implemented in the connectivity.py.

Is there any example QSIPrep command lines calling the connectivity.py that I can follow?

Thank you. Ping

mattcieslak commented 1 year ago

Hi Ping,

We moved those calculations outside of qsiprep, but with the connectivity matrices you should be able to calculate everything in @lindenmp's nctpy.