[FIX] Make docker mounts explicitly rw

PennLINC / xcpEngine

Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.

MIT License

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[FIX] Make docker mounts explicitly rw #375

Closed mattcieslak closed 4 years ago

mattcieslak commented 4 years ago

Users will need to pip install --upgrade xcpengine-container to get the updated wrapper, no updated xcpEngine image is necessary.

This should fix #199's

· [C][/cohort/cohort.csv]
Error in file(file, ifelse(append, "a", "w")) : 
  cannot open the connection
Calls: write.table -> file
In addition: Warning message:
In file(file, ifelse(append, "a", "w")) :
  cannot open file '/cohort/cohort.csv': Read-only file system

bwinsto2 commented 2 years ago

Did the above actually fix things? I upgraded/uninstalled/reinstalled the wrapper and still getting the same error as OP in #199 . this says the latest wrapper was from Jan. 2019.