Open rob-mccutcheon opened 3 years ago
you broke the processing step with # in ``pipeline=prestats,confound2,regress
Thanks @a3sha2 , I only want the regressed cifti files which is why I commented out the rest of the modules, is that the wrong way to do it?
Describe the bug I am trying to get denoised cifti images. I am using the fc-36p_spkreg.dsn as the fc-36p_despike.dsn desnt seem to work due to the issue mentioned in https://github.com/PennBBL/xcpEngine/issues/411
This is my command to run
During the spatial filtering step I get the following error:
Cohort file Paste cohort file between the triple backticks
Design File Paste your entire design (
.dsn
) file between the triple backticks