Describe the bug
What were you trying to do when the crash happened?
I tried to run the structural pipeline, however, the modules run without doing anything.
Cohort file
Paste cohort file between the triple backticks
Design File
Paste your entire design (.dsn) file between the triple backticks
It is the same file given in the tutorials
Error message
Paste your error message between the backticks
· [D][/design/design.dsn]
INFO: /root/matlab/startup.m does not exist … creating
sed: cannot rename /design/sedyyBjXX: Device or resource busy
· [C][/cohort/cohort.csv]
Error in file(file, “rt”) : cannot open the connection
Calls: read.csv → read.table → file
In addition: Warning messages:
1: In file(file, “rt”) :
‘raw = FALSE’ but ‘/cohort/cohort.csv’ is not a regular file
2: In file(file, “rt”) :
cannot open file ‘/cohort/cohort.csv’: it is a directory
Execution halted
· [O][/xcpOutput]
· [M][Executing serially]
····································································
Date: 202208312314
UUID: 5d54fccf-e0da-49bf-94b6-3eb0cf977fa0
Runtime Information
How were you running the software? Docker? Singularity? Directly? If Directly, please consider using Docker or Singluarity first before submitting a bug report.
I used docker.
Additional context
Add any other context about the problem here.
Describe the bug What were you trying to do when the crash happened? I tried to run the structural pipeline, however, the modules run without doing anything.
Cohort file Paste cohort file between the triple backticks
Design File Paste your entire design (
.dsn
) file between the triple backticksError message Paste your error message between the backticks
Runtime Information How were you running the software? Docker? Singularity? Directly? If Directly, please consider using Docker or Singluarity first before submitting a bug report.
I used docker. Additional context Add any other context about the problem here.