allow loading models from local storage by setting ESM_MODELS_DIR and ADOPT_MODELS_DIR
transformer.MultiHead: constructor no longer accepts protein sequence and ID as parameters. This allows re-use of the same object on different sequence, without requiring initialization
transformer.MultiHead: get_results, get_attention and get_representation now require protein sequence and ID as input parameters
transformer.MultiHead: ESM model is only loaded in the constructor
added pandas and specific versions for protobuf in requirements.txt to avoid issues with missing dependencies in setup.py
ESM_MODELS_DIR
andADOPT_MODELS_DIR
transformer.MultiHead
: constructor no longer accepts protein sequence and ID as parameters. This allows re-use of the same object on different sequence, without requiring initializationtransformer.MultiHead
:get_results
,get_attention
andget_representation
now require protein sequence and ID as input parameterstransformer.MultiHead
: ESM model is only loaded in the constructor