PharmGKB / PharmCAT

The Pharmacogenomic Clinical Annotation Tool
Mozilla Public License 2.0
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pharmcat_vcf_preprocessor.py #142

Closed lingyeah89658 closed 1 year ago

lingyeah89658 commented 1 year ago

My bcftools version is 1.8, but when I try to run pharmcat_vcf_preprocessor.py, there is something wrong with it. 微信图片_20230530171649 How to solve it?

lingyeah89658 commented 1 year ago

image

markwoon commented 1 year ago

The clue is right in the output. You need bcftools 1.16 or higher.

1.8 is not higher than 1.16.