PharmGKB / PharmCAT

The Pharmacogenomic Clinical Annotation Tool
Mozilla Public License 2.0
120 stars 39 forks source link

build(deps): bump dask from 2021.6.2 to 2021.10.0 in /src/scripts/preprocessor #74

Closed dependabot[bot] closed 2 years ago

dependabot[bot] commented 3 years ago

Bumps dask from 2021.6.2 to 2021.10.0.

Commits


Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself) - `@dependabot use these labels` will set the current labels as the default for future PRs for this repo and language - `@dependabot use these reviewers` will set the current reviewers as the default for future PRs for this repo and language - `@dependabot use these assignees` will set the current assignees as the default for future PRs for this repo and language - `@dependabot use this milestone` will set the current milestone as the default for future PRs for this repo and language You can disable automated security fix PRs for this repo from the [Security Alerts page](https://github.com/PharmGKB/PharmCAT/network/alerts).
whaleyr commented 2 years ago

@BinglanLi Can you make sure this package gets updated?

whaleyr commented 2 years ago

Binglan fixed this in 59abc8aa344e85703e7c7e7bfe1411479f029ef8

whaleyr commented 2 years ago

@BinglanLi As a tip: when you're doing a dependency update it's best to do it in it's own commit not bundled up with other changes that aren't directly tied to that update (for example, I see this update is mainly about detecting commas in VCF samples). Keeping it isolated helps in case it needs to be rolled back or if we want to move it over to another branch without pulling over unrelated changes.

We can keep this commit as-is, it shouldn't be a problem, but this is just a tip for when you have to do this type of thing next time.

BinglanLi commented 2 years ago

Good point! Should I still do something with this pull request?

whaleyr commented 2 years ago

No, let's just keep it as-is, it shouldn't be a problem.

dependabot[bot] commented 2 years ago

Looks like dask is up-to-date now, so this is no longer needed.