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model_uri #5

Closed jdeck88 closed 1 month ago

jdeck88 commented 1 month ago

We need to populate a field containing a unique identifier for the model that was used. Suggest a model_uri field.

robugur said: can we just the one you just created eg https://biscicol.org/api/v1/inaan/ark:/92250/machine_interpreted_model_run_1? Downstream, we may have metadata about the models we bundle up and can link to this identifier, right?

@jdeck88 said That link above is just an echo of what is contained in the string. What if we make a protocols.io DOI right now? Russell, maybe this protocol can be made under your account? Eventually, this protocol will be referenced in a publication and details/further information can be filled out later. I just made a protocols.io account and a sample protocol in about 5 minutes and got a doi for it. it takes a bit of time to for the DOI to become "activated" but at least you can get a DOI right away to refer to the model you used and update details later.

@ramonawalls said: I'm okay with this. I just wish it were recorded in a github issue.

In Sum, Russell will be creating a DOI pointing to his model protocol at protocols.io and we'll be using that.

rdinnager commented 1 month ago

I think the model should be hosted on HuggingFace (https://huggingface.co/), which allows us to have different model versions, and has been designed for ML models. HuggingFace also allows us to generate a DOI from the model that we can use for the identifier. And we can host the code there as well. Here is an example for a model page: https://huggingface.co/HuggingFaceTB/SmolLM-1.7B . I have an account already and will work on getting the model up there for testing.

jdeck88 commented 1 month ago

Awesome! once you get the DOI, please add this to the 300 record test test as our model_uri value.

jdeck88 commented 1 month ago

Sounds like we agree on the need for using a DOI in model_uri value and @rdinnager is taking care of obtaining that. this particular issue can be closed.