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PhyloGrok / VCFgenerator

Automated variant calling app for NextGen evolutionary genomics
GNU General Public License v3.0
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Multi-threading for the workflow steps #11

Closed PhyloGrok closed 1 year ago

PhyloGrok commented 1 year ago

We noticed that CPU and RAM are not very heavily used during the steps of the workflow. We want to use multi-threading to increase the efficiency of our runs, so that we can use more CPU and RAM, and the runs will take less time. It seems the case that each individual command will have its own multithreading arguments, rather than the entire run overall.

PhyloGrok commented 1 year ago

The multi-threading seems to be specifically designated for each command.