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PhyloGrok / VCFgenerator

Automated variant calling app for NextGen evolutionary genomics
GNU General Public License v3.0
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Clean Mummer4 run from the sample data #4

Closed PhyloGrok closed 1 year ago

PhyloGrok commented 1 year ago

Should generate the dotplot example from the manual, using the Hpylori reference/query genomies: https://mummer4.github.io/tutorial/tutorial.html

PhyloGrok commented 1 year ago

We worked through the Mummer4 errors (see the closed Issues post for that. The next goal will be to generate a collection of dotplot files, using the canonical Shewanella oneidensis genome as the Ref genome, and using multiple species of Shewanella genomes as the query sequences.