Closed GoogleCodeExporter closed 9 years ago
I'm relaying Charles' message below. I got it as a bounced message:
From: <Charles@schwieters.org>
To: <cing@googlecode.com>
Anyway:
Hello Jurgen--
>
> Charles can you specify what you would like to see come out on this?
>
> -1- Do only an XML file with per residue ROGs?
probably easy to smallish, easy to understand plaintext or images would
be better. The idea being that a quick perusal of some cing results be
possible. If the user has interest, a more complete cing run can be
performed. I expect that the amount of output should be tunable from
within the Xplor-NIH script.
> -2- Would it be ok to take a little longer and still run all checks,
> terse and without imagery?
again, this should be tunable. But I'm not certain about default levels
until I get things working a bit.
> -3- Can you recommend parallelization approaches for a multi-node
> setup like you have in Xplor-
> NIH?
It should be possible to use the structure-level parallelism so that
cing is run on compute nodes for each structure. This certainly is my
intention.
Original comment by jurge...@gmail.com
on 30 Oct 2009 at 9:35
I think Geerten's new XML summary file is a good first attempt at addressing
the issue. Let me know when you
guys need more.
Original comment by jurge...@gmail.com
on 8 Feb 2010 at 12:55
Original issue reported on code.google.com by
jurge...@gmail.com
on 28 Oct 2009 at 9:38