Closed GoogleCodeExporter closed 9 years ago
See: http://nmr.cmbi.ru.nl/~jd/cing/out/1i1s.cing
Original comment by jurge...@gmail.com
on 29 May 2008 at 12:08
Original comment by jurge...@gmail.com
on 5 Jun 2008 at 2:48
Waited long enough. Let's keep this list fresh.
Original comment by jurge...@gmail.com
on 17 Oct 2008 at 1:26
Also occurs for entry 1brv
ID : model_000.pdb
CheckID : PL3CHK
Program : WHAT IF
Version : 8.0 (20100115-2150)
Text : Side chain planarity check
DocURL : http://swift.cmbi.ru.nl/whatcheck/
Date : 2010-01-19
Level : RESIDUE
LText : For all DNA/RNA residues, the RMS deviation of all planar atoms to
LText : a fitted plane was determined. This number is given here.
LText :
Type : FLOAT
Poor : > 4.00
Bad : > 6.00
Name : 0 ; A ; 171 ; VAL ; _
Value : 0.000
Name : 0 ; A ; 172 ; PRO ; _
Value : 0.000
Name : 0 ; A ; 173 ; CYS ; _
Value : 0.000
Name : 0 ; A ; 174 ; SER ; _
Value : 0.000
Name : 0 ; A ; 175 ; THR ; _
Value : 0.000
Name : 0 ; A ; 176 ; CYS ; _
Value : 0.000
Name : 0 ; A ; 177 ; GLU ; _
Value : 0.002
Name : 0 ; A ; 178 ; GLY ; _
Value : 0.000
Name : 0 ; A ; 179 ; ASN ; _
Value : 0.005
Name : 0 ; A ; 180 ; LEU ; _
Value : 0.000
Name : 0 ; A ; 181 ; ALA ; _
Value : 0.000
Name : 0 ; A ; 182 ; CYS ; _
Value : 0.000
Name : 0 ; A ; 183 ; LEU ; _
Value : 0.000
Name : 0 ; A ; 184 ; SER ; _
Value : 0.000
Name : 0 ; A ; 185 ; LEU ; _
Value : 0.000
Name : 0 ; A ; 186 ; CYS ; _
Value : 0.000
Name : 0 ; A ; 187 ; HIS ; _
Value : 0.050
Name : 0 ; A ; 188 ; ILE ; _
Value : 0.000
Name : 0 ; A ; 189 ; GLU ; _
Value : 0.002
What is this check?
Original comment by jurge...@gmail.com
on 19 Jan 2010 at 1:04
Asking Gert again.
Original comment by jurge...@gmail.com
on 8 Feb 2010 at 12:49
Reminded again.
Original comment by jurge...@gmail.com
on 11 Feb 2010 at 2:12
The check got corrupted with proton specific checks in the past and they have
persisted. It should be in the
manual by now.
Original comment by jurge...@gmail.com
on 17 Mar 2010 at 8:40
Original issue reported on code.google.com by
jurge...@gmail.com
on 27 May 2008 at 2:18