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PiRSquared17 / glu-genetics

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genedb.find_regions #4

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago 
What steps will reproduce the problem?
1. glu genedb.find_regions file_name --upsnps=N --downsnps=N -o output_name
2. see below
3.

What is the expected output? What do you see instead?
A list of SNPs upstream and downstream from the genes in the list file.

What version of the product are you using? On what operating system?

Please provide any additional information below.
genedb.find_regions  specifically the --upsnps+N and --downsnps=N options 
do not function or were not intended to be an option under 
genedb.find_regions.

Original issue reported on code.google.com by mikegcul...@gmail.com on 6 Oct 2009 at 6:27

GoogleCodeExporter commented 9 years ago 
There is actually a convoluted reason for this, related to using find_regions 
as a pre-
processor for find_snps.  Closing as "YA, MY BAD".

Original comment by bioinformed@gmail.com on 14 Oct 2009 at 6:59