Collapsed BIOM Files Appear to Cause Errors

PitchInteractiveInc / Phinch

Phinch is an open-source framework for visualizing biological data, funded by a grant from the Alfred P. Sloan foundation. This project represents an interdisciplinary collaboration between Pitch Interactive, a data visualization studio in Oakland, CA, and biological researchers at UC Riverside.

http://phinch.org/

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Collapsed BIOM Files Appear to Cause Errors #71

Open bstamps opened 7 years ago

bstamps commented 7 years ago

Loading a collapsed BIOM file into Phinch seems to not work right. Post loading the visualizations still show the individual samples rather than the collapsed files. Removing the "original-sample-ids" column from the associated metadata and reloading into Phinch then causes the preview to hang.

Any ideas on what could be causing this?

iimog commented 7 years ago

I'd like to have a look at this problem. Can you provide a minimal biom file that causes this error?