Make merging overlapping SNPs optional

PlantandFoodResearch / MCHap

Polyploid micro-haplotype assembly using Markov chain Monte Carlo simulation.

MIT License

18 stars 3 forks source link

Make merging overlapping SNPs optional #50

Open timothymillar opened 4 years ago

timothymillar commented 4 years ago

Currently this is done automatically but it should really be an option to turn on. If a duplicate SNP is encountered without this option enabled then an error should be raised.

https://github.com/PlantandFoodResearch/HaploKit/blob/master/haplokit/io/loci.py#L197