PlantandFoodResearch / TEFingerprint

A Python3 library for transposon fingerprinting
MIT License
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Re add in proportion of max count #115

Closed timothymillar closed 5 years ago

timothymillar commented 6 years ago

This is very useful for filtering for unique insertions.

timothymillar commented 6 years ago

Added max_count_proportionin in #118 for v0.3.1

Consider adding count proportion metric to every individual sample e.g: sample_2_count_proportion=0.43.

This would allow for quickly filtering to identify unique insertions in a specific sample e.g: tef-filter-gff example.gff.gz --all 'sample_2_count_proportion>=0.9'

timothymillar commented 5 years ago

done in version 0.3.1