relabel epidermis to plant epidermis

[cmungall]

there is already the precedent of naming terms to disambiguate, e.g. plant cell

can we also relabel epidermis so this doesn't cause confusion when looked at outside the context of plants?

[cooperl09]

Agreed, this makes sense. Fixed in Commit https://github.com/Planteome/plant-ontology/commit/c99336c899d57f239c40ffb33da0b7323880be08.

Also did the same for the parts of the epidermis in commit https://github.com/Planteome/plant-ontology/commit/54a63d798e920fe1446cc8cc87290cf0769c0a28: PO:0004013 plant epidermal cell PO:0000349 plant epidermal initial cell

These updates will be available in our dev browser tomorrow and will be included in the next full release.

One question: there are approximately 60 child terms of plant epidermis- do you think these all should also have 'plant' added to their names? Many are quite plant specific (for example: root epidermis)

[cmungall]

Thanks!

I don't think there is a need for relabeling most of the descendants, I flagged two more here:

PO:0000041 ! epidermal cork cell PO:0000047 ! leaf lamina epidermis PO:0000049 ! leaf lamina abaxial epidermis PO:0000050 ! leaf lamina adaxial epidermis PO:0000051 ! petiole epidermis PO:0000112 ! shoot axis epidermis PO:0000207 ! nectary epidermis PO:0004013 ! epidermal cell <-- ambiguous but you already relabeled thanks! PO:0005013 ! hypocotyl epidermis PO:0005023 ! plant ovary outer epidermis PO:0005024 ! plant ovary inner epidermis PO:0005679 ! epidermis <-- done PO:0006016 ! leaf epidermis PO:0006018 ! leaf adaxial epidermis PO:0006019 ! leaf abaxial epidermis PO:0006035 ! shoot system epidermis PO:0006036 ! root epidermis PO:0006039 ! shoot-borne root epidermis PO:0006040 ! sepal epidermis PO:0006041 ! petal epidermis PO:0006043 ! integument epidermis PO:0006044 ! inner integument epidermis PO:0006045 ! outer integument epidermis PO:0006048 ! seed coat epidermis PO:0006049 ! scutellum epidermis PO:0006052 ! petal abaxial epidermis PO:0006053 ! petal adaxial epidermis PO:0006054 ! sepal abaxial epidermis PO:0006055 ! sepal adaxial epidermis PO:0006056 ! cotyledon epidermis PO:0006057 ! cotyledon abaxial epidermis PO:0006058 ! cotyledon adaxial epidermis PO:0006060 ! filament epidermis PO:0006061 ! stigma epidermis PO:0006062 ! style epidermis PO:0006063 ! plant ovary epidermis PO:0008006 ! nucellar epidermis PO:0008027 ! petiole adaxial epidermis PO:0008029 ! petiole abaxial epidermis PO:0025046 ! shoot axis tuber epidermis PO:0025047 ! aerial tuber epidermis PO:0025048 ! subterranean tuber epidermis PO:0025096 ! carpel epidermis PO:0025097 ! stamen epidermis PO:0025135 ! cigar leaf lamina abaxial epidermis PO:0025152 ! peduncle epidermis PO:0025157 ! phyllome epidermis PO:0025158 ! bract epidermis PO:0025159 ! bract abaxial epidermis PO:0025160 ! bract adaxial epidermis PO:0025178 ! stem epidermis PO:0025179 ! branch epidermis PO:0025184 ! tepal epidermis PO:0025192 ! tepal abaxial epidermis PO:0025193 ! tepal adaxial epidermis PO:0025249 ! leaf sheath epidermis PO:0025250 ! leaf sheath abaxial epidermis PO:0025251 ! leaf sheath adaxial epidermis PO:0025617 ! carpel abaxial epidermis PO:0025618 ! carpel adaxial epidermis PO:0000263 ! non-hair root epidermal cell PO:0000332 ! epidermal pavement cell PO:0000349 ! epidermal initial cell PO:0025164 ! root epidermal cell PO:0025165 ! shoot epidermal cell PO:0025499 ! sepal epidermis giant cell PO:0030068 ! epidermal rhizoid initial cell

[cooperl09]

Agreed, Except for these 3 perhaps: PO:0006043 ! integument epidermis PO:0006044 ! inner integument epidermis PO:0006045 ! outer integument epidermis

[cooperl09]

Updated names and definitions where needed.