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Explore the Plant Trait Ontology on the Planteome site.
http://browser.planteome.org/amigo/term/TO:0000387#display-lineage-tab
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stem anatomy and morphology traits-(syn: core) #157

Open planteome-user opened 12 years ago

planteome-user commented 12 years ago

Proposed new terms: core anatomy and morphology trait > core size: size of the core measured in core shape: shape of core measured in core length: length of core measured in

these traits are for brassicas

Reported by: lauramooray

Original Ticket: obo/plant-trait-ontology-to-requests/156

planteome-user commented 12 years ago

Can you elaborate more on what exactly the part of the plant is and the species?

Original comment by: cooperl09

planteome-user commented 12 years ago

I would say probably shoot system for head (includes both leaves and stem). I'm not sure what they mean by core, but if it is only the stem, then use stem. Otherwise, it is also a shoot system.

Also not sure what bottom is. We have a term for stem base, but I think maybe the bottom includes more than that? If is the base of the stem plus the base of the basal leaves, then you could make a new term for it which would be a collective organ part structure. Ramona

Original comment by: lauramooray

planteome-user commented 12 years ago

I believe core is just the stem,that is nodes and internodes with the latter being very short, basically a plane.

Dennis

Original comment by: lauramooray

planteome-user commented 12 years ago

Proposed new narrow synonyms for stem anatomy and morphology trait, stem size, stem shape and stem length.

Original comment by: lauramooray

cooperl09 commented 9 years ago

Created a new child term: stem weight (TO:0000952): A stem anatomy and morphology trait (TO:0000361) which is associated with the weight of a stem (PO:0009047). Added Xrefs to: weight (PATO:0000128); TO_GIT:157 Added narrow synonym: stalk weight

ejohnson1 commented 9 years ago

Created new child term: stem number (TO:0000953): A stem anatomy and morphology trait (TO:0000361) which is associated with the number of stems (PO:0009047). Added Xrefs to: number (PATO:0001555); TO_GIT:157 Added narrow synonym: stalk weight

Created new child term: stem size (TO:0000954):A stem anatomy and morphology trait (TO:0000361) which is associated with the size of a stem (PO:0009047). Added Xrefs to: size (PATO:0000117); TO_GIT:157 Added narrow synonym: stalk size

cooperl09 commented 9 years ago

Fixed duplicated stem size term which was added accidentally- deleted term stem size TO:0000954. Moved synonym stalk size (related) to TO:0000892.