Planteome / plant-trait-ontology

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specific leaf area (TO:0000562) #271

Open planteome-user opened 10 years ago

planteome-user commented 10 years ago

Specific leaf area

definition: leaf area measured in ratio to leaf dry mass.

synonym: leaf specific area

might need addition of 'leaf dry mass' as new trait.

Reported by: jaiswalp

Original Ticket: obo/plant-trait-ontology-to-requests/271

planteome-user commented 10 years ago

We currently have the existing term:

name: specific leaf area (TO:0000562) -is_a: TO:0000540 ! leaf area - lacks any definition

Proposed definition: "A leaf area (TO:0000540) trait that is the ratio of the leaf area (TO:0000540) to the leaf dry weight (TO:0001014)." Or "A leaf area trait (TO:0000540) that is the ratio of the leaf area (TO:0000540) to the leaf dry mass (TO:New)."

Or we could include both: "A leaf area trait (TO:0000540) that is the ratio of the leaf area (TO:0000540) to the leaf dry weight (TO:0001014) or leaf dry mass (TO:New)."

A quick review of the literature shows that SLA is defined using both weight and mass.

For example: SLA at MaizeGDB

We also have the following terms for aspects of leaf weight.

leaf weight (TO:0000505) def: "A leaf anatomy and morphology trait (TO:0000505) which is associated with the measure of leaf weight."

leaf wet weight id: TO:0000891 def: "A leaf weight trait (TO:0000505) which is associated with the measure of the wet weight of a leaf (PO:0025034)." [PO:0025034, TO:moorel]

leaf dry weight id: TO:0001014 def: "A leaf weight trait (TO:0000505) which is associated with the measure of the dry weight of a leaf (PO:0025034)." [GR:pj, PO:0025034, TO:moorel]

Note that weight and mass are not identical, and are defined differently in PATO:

mass PATO:0000125: A physical quality that inheres in a bearer by virtue of the proportion of the bearer's amount of matter.

weight PATO:0000128 A physical quality inhering in a bearer that has mass near a gravitational body.

Original comment by: cooperl09