Planteome / planteome-annotation-data

This is a place to discuss issues around the Planteome annotation data and store useful scripts etc.
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Physcomitrella Annotations from Cosmoss #16

Open cooperl09 opened 5 years ago

cooperl09 commented 5 years ago

We recently found out that Cosmoss.org has been shutdown. We have 25,593 mRNAs from cosmoss_PpV1.2. These are linked to plant ontology terms through 224,640 annotations. Unfortunately, now all those links back to Cosmoss are now dead. http://browser.planteome.org/amigo/search/annotation?q=*:*&fq=taxon_label:%22Physcomitrella%20patens%22&fq=source:%22cosmoss_PpV1.2%22&sfq=document_category:%22annotation%22 We will have to reassign these to another database if there is one.