Planteome / planteome-annotation-data

This is a place to discuss issues around the Planteome annotation data and store useful scripts etc.
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po_anatomy_germplasm_Zea_MaizeGDB.assoc abusing with/from field? #9

Open elserj opened 6 years ago

elserj commented 6 years ago

From what I can tell, the gaf spec specifies that the with/from field (column 8) should be of the form XX:YYYYYYY. This file, and possibly others, have entries like "from mrl1-IHO". The text "from" should almost certainly not be there.

Might be as easy as changing "from " to "MaizeGDB:", but I'm not sure. Not sure this is even really an issue, but we should at least check it out.