Add network representing office spaces

[collinschwantes]

Add compartment with compressed timescale that represents the physical spaces within in the office.

1) office spaces are contaminated by infectious individuals at certain rate 2) Contamination is density dependent therefore rooms must have a size attribute 3) Contamination decays at some rate therefore rooms must have a ventilation attribute

Need to think about how this would impact direct contact infection rates in other modules. We are explicitly accounting for one type of transmission that had previously been incorporated into the general infection probability.

[collinschwantes]

individuals need a location attribute that ties them to place at each time point through out the day

[collinschwantes]

Need to add an exposed compartment

[collinschwantes]

Need to add an exposed compartment

Created an infectiousness profile instead. Resolves the issue of an E compartment because individuals 0 days post infection have a relative infectiousness of 0 ( dont transmit)

[collinschwantes]

Need to define units for model

infConc = viral particles/meter^3 Air conRate = viral particles/min deconRate = volume air removed/min envTransRate = probability of infection given min infectious concentration

[collinschwantes]

maybe add decayRate == particles naturally falling out of air

[collinschwantes]

https://www.sciencedirect.com/science/article/pii/S0160412020312800 - covid trans paper https://www.medrxiv.org/content/10.1101/2020.06.15.20132027v2.full.pdf - covid trans paper